STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmM/dotJComponent of the Dot/Icm secretion system, predicted inner membrane protein. (94 aa)    
Predicted Functional Partners:
Lfee_2298
Protein IcmL (DotI).
     
 0.806
spkB_3
Protein IcmE (DotG).
       0.802
Lfee_2297
IcmK protein.
       0.790
lphA
LphA (DotK).
       0.790
Lfee_2295
Protein IcmG (DotF).
       0.746
Lfee_2294
IcmC (DotE).
     
 0.740
icmD_2
Protein IcmD (DotP).
       0.702
Lfee_2292
IcmJ protein.
       0.535
Lfee_2302
IcmP protein.
     
 0.507
Lfee_2301
Protein IcmO (DotL).
       0.501
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.