Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2351Hypothetical protein; Belongs to the UPF0276 family. (276 aa)    
Predicted Functional Partners:
Lfee_2352
Hypothetical protein.
 
  
 0.996
Lfee_2192
Signal peptide protein.
 
  
 0.983
Lfee_2350
Silver efflux pump.
 
   
 0.923
cloSI
Clostripain precursor.
   
    0.770
Lfee_1304
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.642
mgtA
Magnesium transporter.
   
    0.610
yloB
Cation efflux transporter.
   
    0.610
virB4
Type IV secretory protein VirB4.
   
    0.599
Lfee_0138
Hypothetical protein.
   
    0.589
Lfee_1030
SAM-dependent O-methyltransferase.
   
    0.586
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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