Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
yajRTransporter, major facilitator family. (429 aa)    
Predicted Functional Partners:
ssb_1
Single strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.703
acpP_2
Acyl carrier protein.
       0.489
fabA
3-hydroxymyristoyl-ACP dehydratase.
       0.489
fabF
Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.489
fabFn
Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.489
waaM_3
Lipid A biosynthesis acyltransferase.
       0.489
fabL
3-oxoacyl-ACP reductase.
       0.486
pdhB_2
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
     
  0.436
sdhC
Succinate dehydrogenase cytochrome b556 subunit C.
  
  
  0.428
trpE
Anthranilate synthase.
     
  0.413
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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