STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
taqIMModification methylase TaqI. (386 aa)    
Predicted Functional Partners:
dcm
DNA (cytosine-5-)-methyltransferase.
  
 
 0.723
Lfee_2324
Transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.581
Lfee_2552
Hypothetical protein.
       0.574
Lfee_2553
Hypothetical protein.
       0.574
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
   
 
  0.560
Lfee_1398
Hypothetical protein.
  
     0.499
lvrE_2
Legionella vir region protein.
       0.476
lvrE_3
Legionella vir region protein.
       0.470
ssb_3
Single strand DNA binding protein.
  
  
 0.446
Lfee_0662
Hypothetical protein.
  
     0.444
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.