Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dedE | yccA | Lfee_3151 | Lfee_2567 | Colicin V. | Carrier/transport protein; Belongs to the BI1 family. | 0.479 |
| hemX | yccA | Lfee_2762 | Lfee_2567 | Uroporphyrinogen III methylase HemX. | Carrier/transport protein; Belongs to the BI1 family. | 0.414 |
| holC | yccA | Lfee_2086 | Lfee_2567 | DNA polymerase III subunit chi. | Carrier/transport protein; Belongs to the BI1 family. | 0.427 |
| msrA | surA_2 | Lfee_0273 | Lfee_3189 | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.471 |
| msrA | yccA | Lfee_0273 | Lfee_2567 | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Carrier/transport protein; Belongs to the BI1 family. | 0.681 |
| nitA | tldD | Lfee_2566 | Lfee_2565 | Nitrilase. | TldD protein. | 0.826 |
| nitA | yccA | Lfee_2566 | Lfee_2567 | Nitrilase. | Carrier/transport protein; Belongs to the BI1 family. | 0.473 |
| surA_2 | msrA | Lfee_3189 | Lfee_0273 | Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.471 |
| surA_2 | yccA | Lfee_3189 | Lfee_2567 | Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Carrier/transport protein; Belongs to the BI1 family. | 0.403 |
| tldD | nitA | Lfee_2565 | Lfee_2566 | TldD protein. | Nitrilase. | 0.826 |
| tldD | yccA | Lfee_2565 | Lfee_2567 | TldD protein. | Carrier/transport protein; Belongs to the BI1 family. | 0.405 |
| yccA | dedE | Lfee_2567 | Lfee_3151 | Carrier/transport protein; Belongs to the BI1 family. | Colicin V. | 0.479 |
| yccA | hemX | Lfee_2567 | Lfee_2762 | Carrier/transport protein; Belongs to the BI1 family. | Uroporphyrinogen III methylase HemX. | 0.414 |
| yccA | holC | Lfee_2567 | Lfee_2086 | Carrier/transport protein; Belongs to the BI1 family. | DNA polymerase III subunit chi. | 0.427 |
| yccA | msrA | Lfee_2567 | Lfee_0273 | Carrier/transport protein; Belongs to the BI1 family. | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.681 |
| yccA | nitA | Lfee_2567 | Lfee_2566 | Carrier/transport protein; Belongs to the BI1 family. | Nitrilase. | 0.473 |
| yccA | surA_2 | Lfee_2567 | Lfee_3189 | Carrier/transport protein; Belongs to the BI1 family. | Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.403 |
| yccA | tldD | Lfee_2567 | Lfee_2565 | Carrier/transport protein; Belongs to the BI1 family. | TldD protein. | 0.405 |