STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilQType IV pilus (Tfp) assembly protein PilQ. (487 aa)    
Predicted Functional Partners:
pilN
Tfp pilus assembly protein PilN.
 
 
 0.995
pilM
Tfp pilus assembly protein, ATPase PilM.
 
 
 0.988
Lfee_2617
Type IV pilus biogenesis protein PilO.
 
 
 0.983
pilC
Pilus assembly protein PilC.
 
 
 
 0.878
pilB
Pilus assembly protein PilB.
 
 
 
 0.852
lspF
Type II secretory pathway protein LspF.
 
 
 
 0.810
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 
 0.799
outO
Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.698
lspD
Type II protein secretion LspD.
 
  
0.676
pilE1
Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family.
 
   
 0.664
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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