STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arnC_1Glycosyltransferase, group 2 family protein (glycan biosynthesis). (242 aa)    
Predicted Functional Partners:
arnT_1
Melitin resistance protein.
 
 
 0.968
Lfee_2627
lipid-A-disaccharide synthase.
 
     0.944
arnT_2
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 0.897
pksJ
Polyketide synthase module.
   
 0.837
Lfee_2629
Phosphatidylglycerophosphatase B.
    
  0.767
tycC_2
Peptide synthetase, non-ribosomal.
  
 0.738
tycC_1
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.642
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.604
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
  0.531
capI
Protein capI.
 
 
  0.488
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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