STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2651Alpha/beta superfamily hydrolase. (362 aa)    
Predicted Functional Partners:
Lfee_0002
Hypothetical protein.
 
     0.778
pdhB_2
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
    
  0.689
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.678
Lfee_0685
24 kDa macrophage-induced major protein.
  
     0.528
Lfee_1322
Acetyltransferase Pat.
    
  0.495
ychJ
Putative SEC-C motif domain protein.
  
    0.480
trpS
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.423
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.