STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2663ABC transport system periplasmic substrate binding protein. (300 aa)    
Predicted Functional Partners:
ttg2A_2
ABC transporter ATP binding protein.
 
 0.996
ttg2B_1
ABC transporter permease.
 
 0.995
Lfee_2664
Transport protein.
 
  0.975
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 0.950
ttg2D
Toluene tolerance protein Ttg2D.
  
 0.931
ttg2B
Toluene tolerance protein Ttg2B.
 
 0.925
Lfee_0155
Anti-anti-sigma factor.
  
 0.894
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
     
  0.843
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
  0.781
ybgF
Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
       0.730
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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