STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dotCDefect in organelle trafficking lipoprotein DotC. (319 aa)    
Predicted Functional Partners:
spkB_3
Protein IcmE (DotG).
  
 
 
 0.994
dotD
Lipoprotein DotD.
   
 
 0.970
Lfee_2297
IcmK protein.
 
 
 
 0.954
yggR
DotB.
 
   
 0.939
Lfee_2295
Protein IcmG (DotF).
    
 
 0.807
Lfee_2302
IcmP protein.
 
   
 0.799
Lfee_2301
Protein IcmO (DotL).
 
   
 0.798
Lfee_2306
IcmT protein.
 
   
 0.780
Lfee_2292
IcmJ protein.
 
   
 0.778
Lfee_0336
Hypothetical protein.
    
   0.777
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.