STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chiA1Chitinase A1 precursor. (505 aa)    
Predicted Functional Partners:
chiD
Chitinase.
 
 0.996
Lfee_0182
Glycosyl hydrolase.
     
 0.846
ybbD
N-acetyl-beta-glucosaminidase.
     
 0.812
celE
Chitinase.
 
  
 0.802
Lfee_0232
L-gulono-gamma-lactone oxidase.
  
     0.767
Lfee_1300
Two component response regulator.
  
     0.760
Lfee_0228
Putative N-hydroxyarylamine O-acetyltransferase.
  
     0.751
pla
Outer membrane protease.
  
     0.742
Lfee_1695
Hypothetical protein.
  
     0.738
Lfee_2902
Putative virulence protein.
  
     0.720
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.