Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_0740 | arcB_3 | Lfee_0740 | Lfee_0690 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.993 |
Lfee_0740 | arcB_4 | Lfee_0740 | Lfee_2359 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.994 |
Lfee_0740 | arcB_5 | Lfee_0740 | Lfee_0828 | Hypothetical protein. | Two-component sensor histidine kinase. | 0.996 |
Lfee_0740 | barA_1 | Lfee_0740 | Lfee_2241 | Hypothetical protein. | Sensory histidine-kinase / response regulator. | 0.994 |
Lfee_0740 | barA_2 | Lfee_0740 | Lfee_0037 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.994 |
Lfee_0740 | cqsS_1 | Lfee_0740 | Lfee_2759 | Hypothetical protein. | Sensor protein LuxN. | 0.961 |
Lfee_0740 | kdpE | Lfee_0740 | Lfee_1657 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.994 |
Lfee_0740 | luxO | Lfee_0740 | Lfee_0870 | Hypothetical protein. | Sensory histidine-kinase / response regulator. | 0.994 |
Lfee_0740 | luxQ_1 | Lfee_0740 | Lfee_0648 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.994 |
Lfee_0740 | luxQ_2 | Lfee_0740 | Lfee_0741 | Hypothetical protein. | Hypothetical protein. | 0.998 |
arcB_3 | Lfee_0740 | Lfee_0690 | Lfee_0740 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.993 |
arcB_3 | arcB_4 | Lfee_0690 | Lfee_2359 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.994 |
arcB_3 | arcB_5 | Lfee_0690 | Lfee_0828 | Sensory box histidine kinase/response regulator. | Two-component sensor histidine kinase. | 0.996 |
arcB_3 | barA_1 | Lfee_0690 | Lfee_2241 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.995 |
arcB_3 | barA_2 | Lfee_0690 | Lfee_0037 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.994 |
arcB_3 | cqsS_1 | Lfee_0690 | Lfee_2759 | Sensory box histidine kinase/response regulator. | Sensor protein LuxN. | 0.924 |
arcB_3 | kdpE | Lfee_0690 | Lfee_1657 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.997 |
arcB_3 | luxO | Lfee_0690 | Lfee_0870 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.996 |
arcB_3 | luxQ_1 | Lfee_0690 | Lfee_0648 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.994 |
arcB_3 | luxQ_2 | Lfee_0690 | Lfee_0741 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.994 |
page 1 of 6