STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhiIPutative efflux pump membrane fusion protein. (415 aa)    
Predicted Functional Partners:
hlyB_2
ABC transporter.
 
  0.982
SunT
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  0.982
hlyB_1
ABC transporter.
 
  0.677
pksJ
Polyketide synthase module.
 
  
 0.579
tolC_2
Outer membrane protein TolC.
  
 0.562
lagD
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
  
  0.545
apxIB
Toxin secretion ATP binding protein.
  
  0.545
Lfee_2780
Hypothetical protein.
       0.536
Lfee_0951
Drug/transporter permease.
  
     0.477
Lfee_1859
Polyketide synthase module.
  
     0.461
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.