STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrP_2Tyrosine-specific transport protein. (396 aa)    
Predicted Functional Partners:
Lfee_2785
Outer membrane protein, OmpA family protein.
       0.794
kup
KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.693
tyrP_1
Tyrosine-specific transport protein.
 
    
0.630
Lfee_2292
IcmJ protein.
  
     0.591
Lfee_2306
IcmT protein.
  
     0.545
Lfee_2301
Protein IcmO (DotL).
  
     0.544
DWF
7-dehydrocholesterol reductase.
  
     0.524
Lfee_2298
Protein IcmL (DotI).
  
     0.498
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.498
dotA
Defect in organelle trafficking protein DotA.
  
 
   0.481
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.