Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lfee_2826Amidase. (207 aa)    
Predicted Functional Partners:
Lfee_2825
Hypothetical protein.
 
     0.833
amiB
N-acetylmuramoyl-L-alanine amidase.
     
 0.608
chiA1
Chitinase A1 precursor.
 
     0.544
ponA
Penicillin binding protein 1A.
     
 0.525
dacA
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.
     
 0.523
chiD
Chitinase.
  
     0.513
Lfee_2929
SH3 domain of the SH3b1 type.
 
  
 0.501
Lfee_0232
L-gulono-gamma-lactone oxidase.
  
     0.487
Lfee_1695
Hypothetical protein.
  
     0.458
Lfee_0231
FAD dependent oxidoreductase.
  
     0.455
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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