Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
osmY_2Osmotically inducible protein Y. (185 aa)    
Predicted Functional Partners:
Lfee_2901
Transmembrane protein.
  
    0.918
yjbJ_1
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.863
yjbJ_2
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.863
zapD
Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.697
Lfee_0200
Coiled-coil protein.
  
     0.687
Lfee_2357
Interaptin.
  
     0.659
Lfee_0671
RasGEF domain protein.
  
     0.640
Lfee_0202
Putative asmA protein.
  
    0.639
wrbA
Flavoprotein WrbA (Trp repressor binding protein).
   
    0.610
wrbA_2
Trp repressor binding protein; Belongs to the WrbA family.
   
    0.610
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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