STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_6Short-chain dehydrogenase/reductase. (264 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase module.
  
 0.898
tycC_2
Peptide synthetase, non-ribosomal.
  
 0.874
ndoR
Xylene monooxygenase.
  
 0.837
Lfee_2374
Acetyltransferase.
  
 0.795
tycC_1
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.766
Lfee_0057
SMP-30/Gluconolaconase/LRE-like region.
 
  
 0.737
Lfee_1859
Polyketide synthase module.
  
 0.677
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.667
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.653
pdhB_2
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 0.651
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.