STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2848Putative ABC transport system permease. (253 aa)    
Predicted Functional Partners:
Lfee_2849
Putative transmembrane protein.
  
  0.942
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
  
 0.921
ttg2A_2
ABC transporter ATP binding protein.
  
 0.921
Lfee_2362
Putative transmembrane protein.
  
  0.757
Lfee_2663
ABC transport system periplasmic substrate binding protein.
  
  0.756
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
   
  0.754
Lfee_2850
Hypothetical protein.
       0.718
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.528
Lfee_0155
Anti-anti-sigma factor.
  
 0.506
msbA
ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
   0.403
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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