Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_1599 | cph2_4 | Lfee_1599 | Lfee_0829 | GGDEF domain-containing sensory box protein. | Regulatory protein (GGDEF and EAL domains). | 0.995 |
| Lfee_1599 | fliG | Lfee_1599 | Lfee_3029 | GGDEF domain-containing sensory box protein. | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.978 |
| Lfee_1599 | ndoR | Lfee_1599 | Lfee_2855 | GGDEF domain-containing sensory box protein. | Xylene monooxygenase. | 0.628 |
| Lfee_1599 | nsrR | Lfee_1599 | Lfee_2853 | GGDEF domain-containing sensory box protein. | DNA-binding transcriptional regulator. | 0.425 |
| Lfee_2851 | nsrR | Lfee_2851 | Lfee_2853 | BNR/Asp-box repeat containing protein. | DNA-binding transcriptional regulator. | 0.414 |
| cph2_4 | Lfee_1599 | Lfee_0829 | Lfee_1599 | Regulatory protein (GGDEF and EAL domains). | GGDEF domain-containing sensory box protein. | 0.995 |
| cph2_4 | fliG | Lfee_0829 | Lfee_3029 | Regulatory protein (GGDEF and EAL domains). | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.978 |
| cph2_4 | ndoR | Lfee_0829 | Lfee_2855 | Regulatory protein (GGDEF and EAL domains). | Xylene monooxygenase. | 0.628 |
| cph2_4 | nsrR | Lfee_0829 | Lfee_2853 | Regulatory protein (GGDEF and EAL domains). | DNA-binding transcriptional regulator. | 0.425 |
| djlA | iscS | Lfee_2111 | Lfee_2643 | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Cysteine desulfurase NifS. | 0.858 |
| djlA | ndoR | Lfee_2111 | Lfee_2855 | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Xylene monooxygenase. | 0.534 |
| djlA | nifU | Lfee_2111 | Lfee_2073 | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Nitrogen fixation protein NifU. | 0.981 |
| djlA | nifU_2 | Lfee_2111 | Lfee_2642 | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | NifU-like protein. | 0.979 |
| djlA | nsrR | Lfee_2111 | Lfee_2853 | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | DNA-binding transcriptional regulator. | 0.416 |
| fliG | Lfee_1599 | Lfee_3029 | Lfee_1599 | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | GGDEF domain-containing sensory box protein. | 0.978 |
| fliG | cph2_4 | Lfee_3029 | Lfee_0829 | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Regulatory protein (GGDEF and EAL domains). | 0.978 |
| fliG | nsrR | Lfee_3029 | Lfee_2853 | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | DNA-binding transcriptional regulator. | 0.564 |
| glbN | ndoR | Lfee_2854 | Lfee_2855 | Hemoglobin (protozoan/cyanobacterial globin family). | Xylene monooxygenase. | 0.925 |
| glbN | nsrR | Lfee_2854 | Lfee_2853 | Hemoglobin (protozoan/cyanobacterial globin family). | DNA-binding transcriptional regulator. | 0.666 |
| iscS | djlA | Lfee_2643 | Lfee_2111 | Cysteine desulfurase NifS. | DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.858 |
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