Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0606 | Lfee_0965 | Lfee_0606 | Lfee_0965 | Putative membrane protein YdgA-like protein. | Spermidine synthase. | 0.589 |
| Lfee_0606 | ubiC | Lfee_0606 | Lfee_2978 | Putative membrane protein YdgA-like protein. | 4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.543 |
| Lfee_0965 | Lfee_0606 | Lfee_0965 | Lfee_0606 | Spermidine synthase. | Putative membrane protein YdgA-like protein. | 0.589 |
| Lfee_0965 | ubiC | Lfee_0965 | Lfee_2978 | Spermidine synthase. | 4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.561 |
| Lfee_2374 | pabB | Lfee_2374 | Lfee_3084 | Acetyltransferase. | Para-aminobenzoate synthase, component I. | 0.436 |
| Lfee_2374 | pheA_1 | Lfee_2374 | Lfee_1459 | Acetyltransferase. | P-protein. | 0.507 |
| Lfee_2374 | pheA_2 | Lfee_2374 | Lfee_2044 | Acetyltransferase. | Prephenate dehydratase. | 0.507 |
| Lfee_2374 | trpE | Lfee_2374 | Lfee_0942 | Acetyltransferase. | Anthranilate synthase. | 0.640 |
| Lfee_2374 | ubiA | Lfee_2374 | Lfee_2977 | Acetyltransferase. | 4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.505 |
| Lfee_2374 | ubiC | Lfee_2374 | Lfee_2978 | Acetyltransferase. | 4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.690 |
| aroA | pabB | Lfee_2988 | Lfee_3084 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Para-aminobenzoate synthase, component I. | 0.480 |
| aroA | pheA_1 | Lfee_2988 | Lfee_1459 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | P-protein. | 0.969 |
| aroA | pheA_2 | Lfee_2988 | Lfee_2044 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydratase. | 0.964 |
| aroA | trpE | Lfee_2988 | Lfee_0942 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Anthranilate synthase. | 0.505 |
| aroA | ubiC | Lfee_2988 | Lfee_2978 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.638 |
| pabB | Lfee_2374 | Lfee_3084 | Lfee_2374 | Para-aminobenzoate synthase, component I. | Acetyltransferase. | 0.436 |
| pabB | aroA | Lfee_3084 | Lfee_2988 | Para-aminobenzoate synthase, component I. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.480 |
| pabB | pheA_1 | Lfee_3084 | Lfee_1459 | Para-aminobenzoate synthase, component I. | P-protein. | 0.826 |
| pabB | pheA_2 | Lfee_3084 | Lfee_2044 | Para-aminobenzoate synthase, component I. | Prephenate dehydratase. | 0.826 |
| pabB | trpD | Lfee_3084 | Lfee_0143 | Para-aminobenzoate synthase, component I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.998 |
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