STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_3046Ankyrin repeats (3 copies). (404 aa)    
Predicted Functional Partners:
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.838
Lfee_1930
Ankyrin repeat-containing protein.
  
     0.764
Lfee_2486
Ankyrin repeat-containing protein.
  
     0.757
Lfee_0449
Ankyrin repeat protein.
  
     0.753
Lfee_2483
SET domain protein.
  
 
  0.720
Lfee_1823
Serine/threonine protein kinase.
   
  0.712
Lfee_1678
Methyltransferase.
 
 
  0.711
metB
Cystathionine beta-lyase.
   
  0.699
cysK
Cystathionine beta synthase.
    
  0.693
ycgE
HTH-type transcriptional repressor YcgE.
    
  0.684
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.