Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| comA | comEA | Lfee_0383 | Lfee_2887 | DNA uptake/competence protein ComA. | Competence protein ComEA. | 0.594 |
| comA | lspE | Lfee_0383 | Lfee_3014 | DNA uptake/competence protein ComA. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.599 |
| comA | lspF | Lfee_0383 | Lfee_0533 | DNA uptake/competence protein ComA. | Type II secretory pathway protein LspF. | 0.743 |
| comA | outO | Lfee_0383 | Lfee_3124 | DNA uptake/competence protein ComA. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.785 |
| comA | pilB | Lfee_0383 | Lfee_3126 | DNA uptake/competence protein ComA. | Pilus assembly protein PilB. | 0.599 |
| comA | pilC | Lfee_0383 | Lfee_3125 | DNA uptake/competence protein ComA. | Pilus assembly protein PilC. | 0.743 |
| comA | pilM | Lfee_0383 | Lfee_2619 | DNA uptake/competence protein ComA. | Tfp pilus assembly protein, ATPase PilM. | 0.519 |
| comA | pilT | Lfee_0383 | Lfee_2279 | DNA uptake/competence protein ComA. | Twitching motility protein PilT. | 0.502 |
| comA | smf | Lfee_0383 | Lfee_0562 | DNA uptake/competence protein ComA. | Protein smf. | 0.883 |
| comA | yggR | Lfee_0383 | Lfee_2687 | DNA uptake/competence protein ComA. | DotB. | 0.502 |
| comEA | comA | Lfee_2887 | Lfee_0383 | Competence protein ComEA. | DNA uptake/competence protein ComA. | 0.594 |
| comEA | lspE | Lfee_2887 | Lfee_3014 | Competence protein ComEA. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.524 |
| comEA | lspF | Lfee_2887 | Lfee_0533 | Competence protein ComEA. | Type II secretory pathway protein LspF. | 0.640 |
| comEA | outO | Lfee_2887 | Lfee_3124 | Competence protein ComEA. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.739 |
| comEA | pilB | Lfee_2887 | Lfee_3126 | Competence protein ComEA. | Pilus assembly protein PilB. | 0.524 |
| comEA | pilC | Lfee_2887 | Lfee_3125 | Competence protein ComEA. | Pilus assembly protein PilC. | 0.640 |
| comEA | smf | Lfee_2887 | Lfee_0562 | Competence protein ComEA. | Protein smf. | 0.449 |
| lspE | comA | Lfee_3014 | Lfee_0383 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | DNA uptake/competence protein ComA. | 0.599 |
| lspE | comEA | Lfee_3014 | Lfee_2887 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Competence protein ComEA. | 0.524 |
| lspE | lspF | Lfee_3014 | Lfee_0533 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II secretory pathway protein LspF. | 0.983 |
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