STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lssDSecretion system protein D. (324 aa)    
Predicted Functional Partners:
apxIB
Toxin secretion ATP binding protein.
 0.986
bepC
Agglutination protein.
 
 0.895
Lfee_0547
Periplasmic protein.
 
   
 0.777
lagD
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
 
 0.760
SunT
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.746
Lfee_0204
Hypothetical protein.
 
     0.743
hlyB_1
ABC transporter.
 0.742
hlyB_2
ABC transporter.
  
 0.707
cvaA
Hemolysin D.
  
     0.689
tolC_2
Outer membrane protein TolC.
  
 0.687
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.