STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_3167TPR repeat-containing protein. (344 aa)    
Predicted Functional Partners:
sohB
Signal peptide peptidase SppA.
  
    0.715
flgC
Flagellar basal body rod protein FlgC.
    
   0.599
Lfee_0974
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.515
arcB_4
Sensory box histidine kinase/response regulator.
  
 
 0.478
pksJ
Polyketide synthase module.
   
 
 0.427
Lfee_0198
Sel-1 protein.
  
     0.419
barA_2
Sensory box histidine kinase/response regulator.
    
 0.409
luxQ_1
Sensory box histidine kinase/response regulator.
    
 0.409
Lfee_0740
Hypothetical protein.
    
 0.409
luxQ_2
Hypothetical protein.
    
 0.409
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.