Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0569 | sohB | Lfee_0569 | Lfee_3168 | Transmembrane protein. | Signal peptide peptidase SppA. | 0.404 |
| Lfee_3167 | sohB | Lfee_3167 | Lfee_3168 | TPR repeat-containing protein. | Signal peptide peptidase SppA. | 0.714 |
| Lfee_3169 | sohB | Lfee_3169 | Lfee_3168 | Hypothetical protein. | Signal peptide peptidase SppA. | 0.477 |
| sohB | Lfee_0569 | Lfee_3168 | Lfee_0569 | Signal peptide peptidase SppA. | Transmembrane protein. | 0.404 |
| sohB | Lfee_3167 | Lfee_3168 | Lfee_3167 | Signal peptide peptidase SppA. | TPR repeat-containing protein. | 0.714 |
| sohB | Lfee_3169 | Lfee_3168 | Lfee_3169 | Signal peptide peptidase SppA. | Hypothetical protein. | 0.477 |
| sohB | topA_1 | Lfee_3168 | Lfee_0564 | Signal peptide peptidase SppA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.406 |
| sohB | zipA | Lfee_3168 | Lfee_0590 | Signal peptide peptidase SppA. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.411 |
| topA_1 | sohB | Lfee_0564 | Lfee_3168 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Signal peptide peptidase SppA. | 0.406 |
| zipA | sohB | Lfee_0590 | Lfee_3168 | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Signal peptide peptidase SppA. | 0.411 |