Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_1467 | Lfee_1523 | Lfee_1467 | Lfee_1523 | Hypothetical protein. | Hypothetical protein. | 0.639 |
Lfee_1467 | Lfee_3262 | Lfee_1467 | Lfee_3262 | Hypothetical protein. | Transposase Tn3. | 0.709 |
Lfee_1523 | Lfee_1467 | Lfee_1523 | Lfee_1467 | Hypothetical protein. | Hypothetical protein. | 0.639 |
Lfee_1523 | Lfee_3262 | Lfee_1523 | Lfee_3262 | Hypothetical protein. | Transposase Tn3. | 0.658 |
Lfee_1559 | Lfee_2505 | Lfee_1559 | Lfee_2505 | Glycosyl hydrolase family 81. | Tn3 transposase DDE domain protein. | 0.754 |
Lfee_1559 | Lfee_2508 | Lfee_1559 | Lfee_2508 | Glycosyl hydrolase family 81. | Hypothetical protein. | 0.766 |
Lfee_1559 | Lfee_3262 | Lfee_1559 | Lfee_3262 | Glycosyl hydrolase family 81. | Transposase Tn3. | 0.451 |
Lfee_1559 | higA_2 | Lfee_1559 | Lfee_1241 | Glycosyl hydrolase family 81. | Putative transcriptional regulator, XRE family. | 0.456 |
Lfee_2505 | Lfee_1559 | Lfee_2505 | Lfee_1559 | Tn3 transposase DDE domain protein. | Glycosyl hydrolase family 81. | 0.754 |
Lfee_2505 | Lfee_2508 | Lfee_2505 | Lfee_2508 | Tn3 transposase DDE domain protein. | Hypothetical protein. | 0.976 |
Lfee_2505 | Lfee_3262 | Lfee_2505 | Lfee_3262 | Tn3 transposase DDE domain protein. | Transposase Tn3. | 0.970 |
Lfee_2505 | higA_2 | Lfee_2505 | Lfee_1241 | Tn3 transposase DDE domain protein. | Putative transcriptional regulator, XRE family. | 0.437 |
Lfee_2508 | Lfee_1559 | Lfee_2508 | Lfee_1559 | Hypothetical protein. | Glycosyl hydrolase family 81. | 0.766 |
Lfee_2508 | Lfee_2505 | Lfee_2508 | Lfee_2505 | Hypothetical protein. | Tn3 transposase DDE domain protein. | 0.976 |
Lfee_2508 | Lfee_3262 | Lfee_2508 | Lfee_3262 | Hypothetical protein. | Transposase Tn3. | 0.946 |
Lfee_2508 | higA_2 | Lfee_2508 | Lfee_1241 | Hypothetical protein. | Putative transcriptional regulator, XRE family. | 0.452 |
Lfee_3261 | Lfee_3262 | Lfee_3261 | Lfee_3262 | Hypothetical protein. | Transposase Tn3. | 0.433 |
Lfee_3262 | Lfee_1467 | Lfee_3262 | Lfee_1467 | Transposase Tn3. | Hypothetical protein. | 0.709 |
Lfee_3262 | Lfee_1523 | Lfee_3262 | Lfee_1523 | Transposase Tn3. | Hypothetical protein. | 0.658 |
Lfee_3262 | Lfee_1559 | Lfee_3262 | Lfee_1559 | Transposase Tn3. | Glycosyl hydrolase family 81. | 0.451 |
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