STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN58104.1Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
OAN58182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
OAN58099.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.839
OAN58102.1
Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.835
OAN58105.1
Structural protein MipA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
OAN62679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.763
OAN57083.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.676
OAN58101.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.606
OAN58815.1
Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
OAN67107.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.548
OAN58103.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
Your Current Organism:
Sphingomonas sp. TDK1
NCBI taxonomy Id: 453247
Other names: S. sp. TDK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.