STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN66267.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)    
Predicted Functional Partners:
OAN66268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
OAN66530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.749
OAN67064.1
Cellulosome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.746
OAN63144.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
OAN66949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
OAN57145.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
OAN61573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
OAN66452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.727
OAN59476.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
Your Current Organism:
Sphingomonas sp. TDK1
NCBI taxonomy Id: 453247
Other names: S. sp. TDK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.