STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN63069.1Disulfide bond formation protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (270 aa)    
Predicted Functional Partners:
OAN63081.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
OAN63074.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
OAN63071.1
type-IV secretion system protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.943
OAN63082.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
OAN63068.1
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
OAN63075.1
type-F conjugative transfer system protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
OAN63078.1
type-F conjugative transfer system pilin assembly protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
OAN63079.1
Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
OAN63066.1
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
OAN63065.1
Type IV conjugative transfer system protein TraL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.923
Your Current Organism:
Sphingomonas sp. TDK1
NCBI taxonomy Id: 453247
Other names: S. sp. TDK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.