STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN63072.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)    
Predicted Functional Partners:
OAN63070.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
OAN63073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
OAN63075.1
type-F conjugative transfer system protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
OAN63074.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.812
OAN63076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.812
OAN63077.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
OAN63071.1
type-IV secretion system protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
OAN63069.1
Disulfide bond formation protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
       0.789
OAN63078.1
type-F conjugative transfer system pilin assembly protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OAN63080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.772
Your Current Organism:
Sphingomonas sp. TDK1
NCBI taxonomy Id: 453247
Other names: S. sp. TDK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.