STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3KY09_ORYBRCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (509 aa)    
Predicted Functional Partners:
J3LJZ4_ORYBR
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.776
J3N4T6_ORYBR
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.776
J3L5Z2_ORYBR
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.713
J3N294_ORYBR
Uncharacterized protein.
   
 0.713
J3LHS7_ORYBR
Uncharacterized protein.
    
 0.709
J3M678_ORYBR
APC1_C domain-containing protein.
    
 0.685
J3LZ23_ORYBR
HORMA domain-containing protein.
   
 
 0.682
J3MBY1_ORYBR
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.682
J3L0W0_ORYBR
DNA helicase; Belongs to the MCM family.
 
 
 0.679
J3L6Q1_ORYBR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.676
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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