STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3L3E1_ORYBRUncharacterized protein. (637 aa)    
Predicted Functional Partners:
J3MU62_ORYBR
TPR_REGION domain-containing protein.
     
 0.720
J3N3A1_ORYBR
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.718
J3MMW0_ORYBR
RING-type domain-containing protein.
     
 0.714
J3LJF1_ORYBR
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.647
J3M0N8_ORYBR
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.647
J3MXC4_ORYBR
Uncharacterized protein.
    
  0.647
J3N4F5_ORYBR
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.647
J3NA50_ORYBR
Phytocyanin domain-containing protein.
    
  0.647
J3LB81_ORYBR
PABS domain-containing protein.
      
 0.552
J3LK30_ORYBR
N-acetyltransferase domain-containing protein.
      
 0.493
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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