STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3L792_ORYBRUncharacterized protein. (414 aa)    
Predicted Functional Partners:
J3MS61_ORYBR
Uncharacterized protein.
  
 0.662
J3MXG9_ORYBR
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
   
 0.620
J3LN90_ORYBR
AMPKBI domain-containing protein.
   
 0.601
J3M8E0_ORYBR
AMPKBI domain-containing protein.
   
 0.601
J3MPB0_ORYBR
AMPKBI domain-containing protein.
   
 0.601
J3MSN7_ORYBR
Tyrosine-protein phosphatase domain-containing protein.
   
 0.599
J3MWX1_ORYBR
AMPKBI domain-containing protein.
   
 0.577
J3MJC4_ORYBR
SurE domain-containing protein.
    
 0.549
J3LJ34_ORYBR
TYR_PHOSPHATASE_2 domain-containing protein.
   
 0.546
J3LA61_ORYBR
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.526
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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