STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LF90_ORYBRNAC domain-containing protein. (308 aa)    
Predicted Functional Partners:
J3MAF1_ORYBR
BHLH domain-containing protein.
  
     0.508
J3L5T0_ORYBR
Methyltransferase.
  
     0.504
J3N5E7_ORYBR
Plastocyanin-like domain-containing protein.
  
     0.501
J3LIK9_ORYBR
Remorin_C domain-containing protein.
  
     0.498
J3LFA9_ORYBR
Uncharacterized protein.
  
     0.495
J3ME50_ORYBR
Uncharacterized protein.
  
     0.494
J3MKL7_ORYBR
Uncharacterized protein.
  
     0.494
J3MRL3_ORYBR
Uncharacterized protein.
  
     0.494
J3KX77_ORYBR
Myb-like domain-containing protein.
  
     0.488
J3LQZ1_ORYBR
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.483
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
Server load: low (10%) [HD]