STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LHB5_ORYBRPeptidylprolyl isomerase. (112 aa)    
Predicted Functional Partners:
J3M554_ORYBR
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.906
J3LTR6_ORYBR
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.889
J3LSM9_ORYBR
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.886
J3MPU1_ORYBR
Uncharacterized protein.
    
 
 0.886
J3KWM0_ORYBR
Uncharacterized protein.
   
 
 0.860
J3MCZ1_ORYBR
Uncharacterized protein.
   
 
 0.860
J3LRL5_ORYBR
WD_REPEATS_REGION domain-containing protein.
    
 
 0.841
J3KUC1_ORYBR
WD_REPEATS_REGION domain-containing protein.
    
 
 0.833
J3N5F2_ORYBR
Uncharacterized protein.
    
 
 0.833
J3L894_ORYBR
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.829
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
Server load: low (14%) [HD]