Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3KV56_ORYBR | J3L2X7_ORYBR | J3KV56 | J3L2X7 | Uncharacterized protein. | Sde2_N_Ubi domain-containing protein. | 0.787 |
J3KV56_ORYBR | J3LIM3_ORYBR | J3KV56 | J3LIM3 | Uncharacterized protein. | F-box domain-containing protein. | 0.536 |
J3KV56_ORYBR | J3LIM5_ORYBR | J3KV56 | J3LIM5 | Uncharacterized protein. | PSP domain-containing protein. | 0.527 |
J3L2X7_ORYBR | J3KV56_ORYBR | J3L2X7 | J3KV56 | Sde2_N_Ubi domain-containing protein. | Uncharacterized protein. | 0.787 |
J3L2X7_ORYBR | J3LIM3_ORYBR | J3L2X7 | J3LIM3 | Sde2_N_Ubi domain-containing protein. | F-box domain-containing protein. | 0.502 |
J3LIM3_ORYBR | J3KV56_ORYBR | J3LIM3 | J3KV56 | F-box domain-containing protein. | Uncharacterized protein. | 0.536 |
J3LIM3_ORYBR | J3L2X7_ORYBR | J3LIM3 | J3L2X7 | F-box domain-containing protein. | Sde2_N_Ubi domain-containing protein. | 0.502 |
J3LIM3_ORYBR | J3LIM5_ORYBR | J3LIM3 | J3LIM5 | F-box domain-containing protein. | PSP domain-containing protein. | 0.485 |
J3LIM3_ORYBR | J3LNM9_ORYBR | J3LIM3 | J3LNM9 | F-box domain-containing protein. | Uncharacterized protein. | 0.511 |
J3LIM3_ORYBR | J3LRV4_ORYBR | J3LIM3 | J3LRV4 | F-box domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.591 |
J3LIM3_ORYBR | J3MKB7_ORYBR | J3LIM3 | J3MKB7 | F-box domain-containing protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.495 |
J3LIM3_ORYBR | J3MQU9_ORYBR | J3LIM3 | J3MQU9 | F-box domain-containing protein. | Sm domain-containing protein. | 0.511 |
J3LIM3_ORYBR | J3N278_ORYBR | J3LIM3 | J3N278 | F-box domain-containing protein. | YjeF N-terminal domain-containing protein. | 0.549 |
J3LIM3_ORYBR | J3N3S9_ORYBR | J3LIM3 | J3N3S9 | F-box domain-containing protein. | Uncharacterized protein. | 0.509 |
J3LIM3_ORYBR | J3NF46_ORYBR | J3LIM3 | J3NF46 | F-box domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.513 |
J3LIM5_ORYBR | J3KV56_ORYBR | J3LIM5 | J3KV56 | PSP domain-containing protein. | Uncharacterized protein. | 0.527 |
J3LIM5_ORYBR | J3LIM3_ORYBR | J3LIM5 | J3LIM3 | PSP domain-containing protein. | F-box domain-containing protein. | 0.485 |
J3LIM5_ORYBR | J3MQU9_ORYBR | J3LIM5 | J3MQU9 | PSP domain-containing protein. | Sm domain-containing protein. | 0.947 |
J3LIM5_ORYBR | J3N3S9_ORYBR | J3LIM5 | J3N3S9 | PSP domain-containing protein. | Uncharacterized protein. | 0.986 |
J3LNM9_ORYBR | J3LIM3_ORYBR | J3LNM9 | J3LIM3 | Uncharacterized protein. | F-box domain-containing protein. | 0.511 |
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