STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LKY9_ORYBRSTAS domain-containing protein. (563 aa)    
Predicted Functional Partners:
J3N750_ORYBR
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.597
J3L0A5_ORYBR
Uncharacterized protein.
    
 
 0.506
J3M9N8_ORYBR
Uncharacterized protein.
   
 
 0.483
J3MIH6_ORYBR
PsbP domain-containing protein.
   
 
 0.471
J3MX33_ORYBR
Uncharacterized protein.
    
   0.471
PsbJ
Uncharacterized protein.
    
   0.448
J3MW79_ORYBR
Protein kinase domain-containing protein.
    
 
 0.440
J3MMY2_ORYBR
SPX domain-containing protein.
      
 0.439
J3N2C6_ORYBR
SPX domain-containing protein.
      
 0.439
J3LXP7_ORYBR
Uncharacterized protein.
   
   0.424
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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