STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LPC0_ORYBRUncharacterized protein; Belongs to the peptidase S10 family. (126 aa)    
Predicted Functional Partners:
J3MDJ1_ORYBR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
  0.550
J3KYP7_ORYBR
Phytocyanin domain-containing protein.
  
 
   0.541
J3LU21_ORYBR
Uncharacterized protein.
  
     0.537
J3MVC6_ORYBR
Uncharacterized protein.
  
   0.537
J3L0X6_ORYBR
Uncharacterized protein.
  
     0.535
J3KWA0_ORYBR
TAXi_C domain-containing protein.
  
 0.534
J3LV88_ORYBR
C2H2-type domain-containing protein.
  
 
  0.534
J3MZC5_ORYBR
BAG domain-containing protein.
  
 
   0.529
J3LMW3_ORYBR
Uncharacterized protein.
  
     0.526
J3L9Y4_ORYBR
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
   0.524
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.