Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| J3KVD6_ORYBR | J3L667_ORYBR | J3KVD6 | J3L667 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.965 |
| J3KVD6_ORYBR | J3LD56_ORYBR | J3KVD6 | J3LD56 | Uncharacterized protein. | Sm domain-containing protein. | 0.691 |
| J3KVD6_ORYBR | J3LPM8_ORYBR | J3KVD6 | J3LPM8 | Uncharacterized protein. | Uncharacterized protein. | 0.898 |
| J3KVD6_ORYBR | J3LX99_ORYBR | J3KVD6 | J3LX99 | Uncharacterized protein. | Sm domain-containing protein. | 0.691 |
| J3KVD6_ORYBR | J3LZV9_ORYBR | J3KVD6 | J3LZV9 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.490 |
| J3KVD6_ORYBR | J3M6S6_ORYBR | J3KVD6 | J3M6S6 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.773 |
| J3KVD6_ORYBR | J3MAD5_ORYBR | J3KVD6 | J3MAD5 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.746 |
| J3KVD6_ORYBR | J3MQG9_ORYBR | J3KVD6 | J3MQG9 | Uncharacterized protein. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.777 |
| J3KVD6_ORYBR | J3MQU9_ORYBR | J3KVD6 | J3MQU9 | Uncharacterized protein. | Sm domain-containing protein. | 0.669 |
| J3KVD6_ORYBR | J3N3W8_ORYBR | J3KVD6 | J3N3W8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.490 |
| J3L667_ORYBR | J3KVD6_ORYBR | J3L667 | J3KVD6 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.965 |
| J3L667_ORYBR | J3LD56_ORYBR | J3L667 | J3LD56 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm domain-containing protein. | 0.999 |
| J3L667_ORYBR | J3LPM8_ORYBR | J3L667 | J3LPM8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.991 |
| J3L667_ORYBR | J3LX99_ORYBR | J3L667 | J3LX99 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm domain-containing protein. | 0.999 |
| J3L667_ORYBR | J3LZV9_ORYBR | J3L667 | J3LZV9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.879 |
| J3L667_ORYBR | J3M6S6_ORYBR | J3L667 | J3M6S6 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| J3L667_ORYBR | J3MAD5_ORYBR | J3L667 | J3MAD5 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| J3L667_ORYBR | J3MQG9_ORYBR | J3L667 | J3MQG9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.999 |
| J3L667_ORYBR | J3MQU9_ORYBR | J3L667 | J3MQU9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm domain-containing protein. | 0.999 |
| J3L667_ORYBR | J3N3W8_ORYBR | J3L667 | J3N3W8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.879 |
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