STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LPY9_ORYBRU-box domain-containing protein. (1037 aa)    
Predicted Functional Partners:
J3L032_ORYBR
MPN domain-containing protein.
    
 
 0.983
J3L9V2_ORYBR
OTU domain-containing protein.
    
 
 0.983
J3L8Q3_ORYBR
HECT domain-containing protein.
   
 0.946
J3M3J3_ORYBR
HECT domain-containing protein.
   
 0.946
J3M7Y2_ORYBR
HECT domain-containing protein.
   
 0.946
J3LYN2_ORYBR
Uncharacterized protein.
    
 
 0.939
J3M116_ORYBR
Uncharacterized protein.
    
 
 0.939
J3L4L6_ORYBR
XPC-binding domain-containing protein.
   
 0.873
J3LA62_ORYBR
Uncharacterized protein.
   
 0.873
J3LA63_ORYBR
Uncharacterized protein.
   
 0.873
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.