STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LSU1_ORYBRUncharacterized protein. (1151 aa)    
Predicted Functional Partners:
J3L4G1_ORYBR
Uncharacterized protein.
  
  
 
0.911
J3KVW4_ORYBR
Uncharacterized protein.
  
  
 
0.901
J3L2X7_ORYBR
Sde2_N_Ubi domain-containing protein.
    
 0.808
J3LG10_ORYBR
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.777
J3LGQ0_ORYBR
Rhodanese domain-containing protein.
    
 0.777
J3LNM9_ORYBR
Uncharacterized protein.
   
 0.770
J3M0S6_ORYBR
CBF domain-containing protein.
   
  0.727
J3MQ16_ORYBR
Slu7 domain-containing protein.
    
 0.709
J3KVJ3_ORYBR
Uncharacterized protein.
    
 0.708
J3NC53_ORYBR
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.708
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.