STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LSW2_ORYBRCOR domain-containing protein. (1389 aa)    
Predicted Functional Partners:
J3LBY0_ORYBR
Uncharacterized protein; Belongs to the peptidase S9B family.
    
 
 0.721
J3LRN5_ORYBR
WD_REPEATS_REGION domain-containing protein.
     
 0.673
J3L214_ORYBR
TPR_REGION domain-containing protein.
    
 0.589
J3MC75_ORYBR
Uncharacterized protein.
    
 
 0.527
J3MZI0_ORYBR
Pantothenate kinase 2; Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration.
    
 
 0.527
J3LCW4_ORYBR
Uncharacterized protein.
   
 
 0.513
J3N6I6_ORYBR
C2 domain-containing protein.
  
 
 
 0.500
J3KZD9_ORYBR
Ubiquitin-like domain-containing protein.
    
  0.484
J3LIX0_ORYBR
Ubiquitin-like domain-containing protein.
    
  0.484
J3M468_ORYBR
Ubiquitin-like domain-containing protein.
    
  0.484
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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