Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3L7T6_ORYBR | J3LJH5_ORYBR | J3L7T6 | J3LJH5 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Glycos_transf_3 domain-containing protein. | 0.429 |
J3L7T6_ORYBR | J3LT30_ORYBR | J3L7T6 | J3LT30 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Fe2OG dioxygenase domain-containing protein. | 0.900 |
J3L7T6_ORYBR | J3M8U3_ORYBR | J3L7T6 | J3M8U3 | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.902 |
J3LJH5_ORYBR | J3L7T6_ORYBR | J3LJH5 | J3L7T6 | Glycos_transf_3 domain-containing protein. | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | 0.429 |
J3LJH5_ORYBR | J3LT30_ORYBR | J3LJH5 | J3LT30 | Glycos_transf_3 domain-containing protein. | Fe2OG dioxygenase domain-containing protein. | 0.400 |
J3LT30_ORYBR | J3L7T6_ORYBR | J3LT30 | J3L7T6 | Fe2OG dioxygenase domain-containing protein. | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | 0.900 |
J3LT30_ORYBR | J3LJH5_ORYBR | J3LT30 | J3LJH5 | Fe2OG dioxygenase domain-containing protein. | Glycos_transf_3 domain-containing protein. | 0.400 |
J3LT30_ORYBR | J3LXG8_ORYBR | J3LT30 | J3LXG8 | Fe2OG dioxygenase domain-containing protein. | Uncharacterized protein. | 0.552 |
J3LT30_ORYBR | J3M8U3_ORYBR | J3LT30 | J3M8U3 | Fe2OG dioxygenase domain-containing protein. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
J3LT30_ORYBR | J3MMH9_ORYBR | J3LT30 | J3MMH9 | Fe2OG dioxygenase domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.467 |
J3LXG8_ORYBR | J3LT30_ORYBR | J3LXG8 | J3LT30 | Uncharacterized protein. | Fe2OG dioxygenase domain-containing protein. | 0.552 |
J3M8U3_ORYBR | J3L7T6_ORYBR | J3M8U3 | J3L7T6 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. | 0.902 |
J3M8U3_ORYBR | J3LT30_ORYBR | J3M8U3 | J3LT30 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Fe2OG dioxygenase domain-containing protein. | 0.900 |
J3MMH9_ORYBR | J3LT30_ORYBR | J3MMH9 | J3LT30 | GRAS domain-containing protein; Belongs to the GRAS family. | Fe2OG dioxygenase domain-containing protein. | 0.467 |