STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LUE7_ORYBRHMA domain-containing protein. (153 aa)    
Predicted Functional Partners:
J3M642_ORYBR
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.530
J3MQ42_ORYBR
Uncharacterized protein; Belongs to the plant LTP family.
  
     0.526
J3MIB3_ORYBR
Uncharacterized protein.
  
     0.522
J3LE59_ORYBR
Uncharacterized protein.
  
     0.521
J3LTY8_ORYBR
Uncharacterized protein.
  
     0.511
J3LK69_ORYBR
Uncharacterized protein.
  
     0.502
J3LZ70_ORYBR
Uncharacterized protein.
  
     0.501
J3ME25_ORYBR
WAK_assoc domain-containing protein.
  
     0.499
J3L1T4_ORYBR
DUF642 domain-containing protein.
  
     0.497
J3L774_ORYBR
CBS domain-containing protein.
  
     0.495
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.