STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LUT0_ORYBRNascent polypeptide-associated complex subunit beta. (159 aa)    
Predicted Functional Partners:
J3L7P7_ORYBR
NAC-A/B domain-containing protein.
   
 
 0.924
J3LJE1_ORYBR
NAC-A/B domain-containing protein.
   
 
 0.924
J3M6J3_ORYBR
NAC-A/B domain-containing protein.
   
 
 0.924
J3M6J5_ORYBR
NAC-A/B domain-containing protein.
   
 
 0.924
J3L2W4_ORYBR
Uncharacterized protein.
   
 
 0.918
J3LNP0_ORYBR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.914
J3MJG9_ORYBR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.914
J3MYM8_ORYBR
Uncharacterized protein.
   
   0.914
J3M446_ORYBR
Ribosomal_L2_C domain-containing protein.
   
   0.912
J3LZ83_ORYBR
Uncharacterized protein.
   
   0.896
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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