STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LWF7_ORYBRLipase; Belongs to the AB hydrolase superfamily. Lipase family. (417 aa)    
Predicted Functional Partners:
J3L4B7_ORYBR
PNPLA domain-containing protein.
    
 0.915
J3LU14_ORYBR
PNPLA domain-containing protein.
    
 0.915
J3MVH7_ORYBR
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
  
  
 
0.904
J3MUN9_ORYBR
AB hydrolase-1 domain-containing protein.
  
  
 
0.903
J3LCQ9_ORYBR
Uncharacterized protein.
    
 0.902
J3N2F0_ORYBR
FAD-binding PCMH-type domain-containing protein.
     
 0.900
J3MAP3_ORYBR
Uncharacterized protein.
    
 0.494
J3LN65_ORYBR
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.423
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.407
J3N1G0_ORYBR
Uncharacterized protein.
  
 
 0.401
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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