STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3M043_ORYBRAP2/ERF domain-containing protein. (334 aa)    
Predicted Functional Partners:
J3M920_ORYBR
Uncharacterized protein.
  
     0.507
J3LGN0_ORYBR
Dof-type domain-containing protein.
  
     0.494
J3LSP6_ORYBR
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family.
  
     0.492
J3L9R8_ORYBR
Vps4_C domain-containing protein.
  
     0.470
J3L793_ORYBR
Uncharacterized protein.
  
     0.467
J3LNR7_ORYBR
CCT domain-containing protein.
  
     0.457
J3M7L3_ORYBR
Dof-type domain-containing protein.
  
   
 0.454
J3KZ85_ORYBR
AP2/ERF domain-containing protein.
  
     0.450
J3L4K9_ORYBR
MATH domain-containing protein.
  
     0.448
J3M216_ORYBR
Uncharacterized protein.
  
   
 0.446
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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