STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3M7Y1_ORYBRCBFD_NFYB_HMF domain-containing protein. (132 aa)    
Predicted Functional Partners:
J3LKJ1_ORYBR
Uncharacterized protein.
  
 0.822
J3LPQ3_ORYBR
Uncharacterized protein.
  
 0.815
J3MMV5_ORYBR
Uncharacterized protein.
  
 0.813
J3LRU4_ORYBR
Uncharacterized protein.
  
 0.797
J3MGP1_ORYBR
CBFD_NFYB_HMF domain-containing protein.
  
 0.752
J3M2S6_ORYBR
CBFD_NFYB_HMF domain-containing protein.
  
 0.750
J3LA01_ORYBR
CBFD_NFYB_HMF domain-containing protein.
  
 0.748
J3MR80_ORYBR
Nuclear transcription factor Y subunit C.
  
 0.746
J3NEX6_ORYBR
Uncharacterized protein.
  
 0.739
J3KVL1_ORYBR
Histone domain-containing protein.
  
 0.731
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.