STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3M8E7_ORYBRUncharacterized protein. (342 aa)    
Predicted Functional Partners:
J3KX94_ORYBR
ANK_REP_REGION domain-containing protein.
    
 0.830
J3LNM9_ORYBR
Uncharacterized protein.
   
 0.827
J3MNA7_ORYBR
Helicase C-terminal domain-containing protein.
   
 0.820
J3M6E9_ORYBR
Uncharacterized protein.
   
 0.816
J3LQM0_ORYBR
Uncharacterized protein.
   
 0.804
J3MQ16_ORYBR
Slu7 domain-containing protein.
    
 0.802
J3NCH2_ORYBR
MI domain-containing protein.
   
 0.795
J3NF46_ORYBR
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.792
J3MMR2_ORYBR
WD_REPEATS_REGION domain-containing protein.
   
 0.791
J3NBP4_ORYBR
Uncharacterized protein.
   
  0.783
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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