STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3M9E5_ORYBRENTH domain-containing protein. (566 aa)    
Predicted Functional Partners:
J3LJ68_ORYBR
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
   
 0.633
J3LJL3_ORYBR
Uncharacterized protein.
    
 0.515
J3MHU7_ORYBR
Uncharacterized protein.
    
 0.515
J3LG10_ORYBR
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.500
J3LGQ0_ORYBR
Rhodanese domain-containing protein.
    
 0.500
J3N5C5_ORYBR
Clathrin-link domain-containing protein.
    
 0.472
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.472
J3NAM6_ORYBR
Uncharacterized protein.
    
 0.472
J3L5P5_ORYBR
ENTH domain-containing protein.
   
 0.439
J3LI57_ORYBR
ENTH domain-containing protein.
   
 0.439
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.